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| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
VfR Aalen | 16 | 9 | 4 | 3 | 18:10 | 8 | 31 |
| 2 |
|
SC Freiburg II | 16 | 7 | 5 | 4 | 29:16 | 13 | 26 |
| 3 |
|
1. FC Nürnberg II | 16 | 7 | 4 | 5 | 23:20 | 3 | 25 |
| 4 |
|
Hessen Kassel | 16 | 4 | 8 | 4 | 25:27 | -2 | 20 |
| 5 |
|
Eintracht Frankfurt II | 16 | 5 | 4 | 7 | 24:22 | 2 | 19 |
| 6 |
|
Stuttgarter Kickers | 16 | 4 | 6 | 6 | 19:22 | -3 | 18 |
| 7 |
|
SSV Ulm 1846 | 16 | 4 | 6 | 6 | 21:26 | -5 | 18 |
| 8 |
|
Karlsruher SC II | 16 | 4 | 4 | 8 | 18:29 | -11 | 16 |
| 9 |
|
SG Sonnenhof Großaspach | 16 | 4 | 3 | 9 | 16:20 | -4 | 15 |
| 10 |
|
SpVgg Weiden | 16 | 5 | 0 | 11 | 27:37 | -10 | 15 |
| 11 |
|
SpVgg Greuther Fürth II | 16 | 4 | 2 | 10 | 18:32 | -14 | 14 |
| 12 |
|
SSV Reutlingen | 16 | 4 | 2 | 10 | 15:30 | -15 | 14 |
| 13 |
|
1. FC Eintracht Bamberg | 16 | 2 | 6 | 8 | 21:36 | -15 | 12 |
| 14 |
|
SV Wehen Wiesbaden II | 16 | 3 | 3 | 10 | 17:32 | -15 | 12 |
| 15 |
|
TSV 1860 München II | 16 | 2 | 4 | 10 | 11:21 | -10 | 10 |
| 16 |
|
SC Pfullendorf | 16 | 1 | 6 | 9 | 12:25 | -13 | 9 |
| 17 |
|
SV Darmstadt 98 | 16 | 0 | 8 | 8 | 11:24 | -13 | 8 |
| 18 |
|
Bayern Alzenau | 16 | 2 | 2 | 12 | 9:32 | -23 | 8 |
| Aufstieg | |
| Abstieg |
|
# Der SSV Reutlingen und Eintracht Bamberg meldeten während der Saison 2009/2010 Insolvenz an und stehen somit bereits als Absteiger fest. |
