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| 24.08.2008 | 15:00 | FK Šilutė | - | FK Šiauliai | 2:0 | |
| 15:00 | FK Zalgiris | - | FK Atlantas | 5:1 | ||
| 15:00 | FK Sūduva | - | FK Ekranas | 0:0 | ||
| 12.11.2008 | 17:00 | FBK Kaunas | - | FK Vetra | 2:3 |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FK Ekranas | 18 | 12 | 5 | 1 | 24:7 | 17 | 41 |
| 2 |
|
FK Sūduva | 18 | 9 | 5 | 4 | 20:13 | 7 | 32 |
| 3 |
|
FBK Kaunas | 18 | 9 | 4 | 5 | 33:13 | 20 | 31 |
| 4 |
|
FK Vetra | 18 | 8 | 5 | 5 | 23:19 | 4 | 29 |
| 5 |
|
FK Šiauliai | 18 | 4 | 7 | 7 | 16:20 | -4 | 19 |
| 6 |
|
FK Zalgiris | 18 | 3 | 9 | 6 | 16:17 | -1 | 18 |
| 7 |
|
FK Atlantas | 18 | 4 | 6 | 8 | 18:27 | -9 | 18 |
| 8 |
|
FK Šilutė | 18 | 1 | 3 | 14 | 12:46 | -34 | 6 |
| Champions League Quali. | |
| Europa League |
|
# Dem FK Vilnius wurde vor der Saison die Lizenz entzogen. # Cup-Sieger: FK Suduva |
